Publications

Here, you will find a comprehensive collection of research publications that showcase the latest advancements and discoveries in the field of Image Data Analysis. Our team have published a wide range of articles and research papers covering various topics and research areas including medical image analysis, deep learning, and computer vision. We are dedicated to exploring the frontiers of scientific research and innovation, and we are committed to sharing our knowledge and expertise with the world. We invite you to browse our collection and discover the groundbreaking work that our team has produced.

2024

Cechnicka S., Ball J., Reynaud H., Arthurs C., Roufosse C., Kainz B.:
Realistic Data Enrichment for Robust Image Segmentation in Histopathology
5th MICCAI Workshop on Domain Adaptation and Representation Transfer, DART 2023 (Vancouver, BC, CAN, 12/10/2023 - 12/10/2023)
In: Lisa Koch, M. Jorge Cardoso, Enzo Ferrante, Konstantinos Kamnitsas, Mobarakol Islam, Meirui Jiang, Nicola Rieke, Sotirios A. Tsaftaris, Dong Yang (ed.): Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2024
DOI: 10.1007/978-3-031-45857-6_7
BibTeX: Download
Maier-Hein L., Reinke A., Godau P., Tizabi MD., Buettner F., Christodoulou E., Glocker B., Isensee F., Kleesiek J., Kozubek M., Reyes M., Riegler MA., Wiesenfarth M., Kavur AE., Sudre CH., Baumgartner M., Eisenmann M., Heckmann-Nötzel D., Rädsch T., Acion L., Antonelli M., Arbel T., Bakas S., Benis A., Blaschko MB., Cardoso MJ., Cheplygina V., Cimini BA., Collins GS., Farahani K., Ferrer L., Galdran A., van Ginneken B., Haase R., Hashimoto DA., Hoffman MM., Huisman M., Jannin P., Kahn CE., Kainmueller D., Kainz B., Karargyris A., Karthikesalingam A., Kofler F., Kopp-Schneider A., Kreshuk A., Kurc T., Landman BA., Litjens G., Madani A., Maier-Hein K., Martel AL., Mattson P., Meijering E., Menze B., Moons KG., Müller H., Nichyporuk B., Nickel F., Petersen J., Rajpoot N., Rieke N., Saez-Rodriguez J., Sánchez CI., Shetty S., van Smeden M., Summers RM., Taha AA., Tiulpin A., Tsaftaris SA., Van Calster B., Varoquaux G., Jäger PF.:
Metrics reloaded: recommendations for image analysis validation
In: Nature Methods 21 (2024), p. 195-212
ISSN: 1548-7091
DOI: 10.1038/s41592-023-02151-z
BibTeX: Download

2023

Avgerinos E., Oppenheimer J., Al-Noor F., Karimaghaei R., Adler A., Singöhl S., Kainz B., Mandegaran R., Heinrich MP., Spiliopoulos S., Geroulakos G., Mischkewitz S.:
Remote Expert Deep Venous Thrombosis Triaging of Novice-User Compression Sonography with Artificial Intelligence Guidance
In: Journal of Vascular Surgery: Venous and Lymphatic Disorders 11 (2023), p. 449
DOI: 10.1016/j.jvsv.2022.12.025
BibTeX: Download
Baugh M., Tan J., Müller JP., Dombrowski M., Batten J., Kainz B.:
Many Tasks Make Light Work: Learning to Localise Medical Anomalies from Multiple Synthetic Tasks
26th International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2023 (Vancouver, BC, CAN, 08/10/2023 - 12/10/2023)
In: Hayit Greenspan, Hayit Greenspan, Anant Madabhushi, Parvin Mousavi, Septimiu Salcudean, James Duncan, Tanveer Syeda-Mahmood, Russell Taylor (ed.): Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2023
DOI: 10.1007/978-3-031-43907-0_16
BibTeX: Download
Day TG., Budd S., Tan J., Matthew J., Skelton E., Jowett V., Lloyd D., Gomez A., Hajnal JV., Razavi R., Kainz B., Simpson JM.:
Prenatal diagnosis of hypoplastic left heart syndrome on ultrasound using artificial intelligence: How does performance compare to a current screening programme?
In: Prenatal Diagnosis (2023)
ISSN: 0197-3851
DOI: 10.1002/pd.6445
BibTeX: Download
Day TG., Kainz B., Razavi R., Simpson J.:
RE: Wang et al. Diagnosis of fetal total anomalous pulmonary venous connection based on the post-left atrium space ratio using artificial intelligence
In: Prenatal Diagnosis (2023)
ISSN: 0197-3851
DOI: 10.1002/pd.6287
BibTeX: Download
Day TG., Simpson JM., Razavi R., Kainz B.:
Improving image labelling quality
In: Nature Machine Intelligence 5 (2023), p. 335-336
ISSN: 2522-5839
DOI: 10.1038/s42256-023-00645-1
BibTeX: Download
Hinterreiter A., Humer C., Kainz B., Streit M.:
ParaDime: A Framework for Parametric Dimensionality Reduction
In: Computer Graphics Forum 42 (2023), p. 337-348
ISSN: 0167-7055
DOI: 10.1111/cgf.14834
BibTeX: Download
Jehn C., Müller J., Kainz B.:
Learnable Slice-to-volume Reconstruction for Motion Compensation in Fetal Magnetic Resonance Imaging
Bildverarbeitung für die Medizin Workshop, BVM 2023 (Braunschweig, 02/07/2023 - 04/07/2023)
In: Thomas M. Deserno, Heinz Handels, Andreas Maier, Klaus Maier-Hein, Christoph Palm, Thomas Tolxdorff (ed.): Informatik aktuell 2023
DOI: 10.1007/978-3-658-41657-7_10
BibTeX: Download
Kainz B.:
Keynote: Beyond Supervised Learning Exploring Novel Machine Learning Approaches for Robust Medical Image Analysis
Bildverarbeitung für die Medizin Workshop, BVM 2023 (Braunschweig, 02/07/2023 - 04/07/2023)
In: Thomas M. Deserno, Heinz Handels, Andreas Maier, Klaus Maier-Hein, Christoph Palm, Thomas Tolxdorff (ed.): Informatik aktuell 2023
DOI: 10.1007/978-3-658-41657-7_1
BibTeX: Download
Kainz B., Noble JA., Schnabel J., Khanal B., Müller J., Day T. (ed.):
Simplifying Medical Ultrasound
Cham: 2023
(Lecture Notes in Computer Science, Vol. 14337)
ISBN: 9783031445200
DOI: 10.1007/978-3-031-44521-7
BibTeX: Download
Li L., Ma Q., Ouyang C., Li Z., Meng Q., Zhang W., Qiao M., Kyriakopoulou V., Hajnal JV., Rueckert D., Kainz B.:
Robust Segmentation via Topology Violation Detection and Feature Synthesis
26th International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2023 (Vancouver, BC, 08/10/2023 - 12/10/2023)
In: Hayit Greenspan, Hayit Greenspan, Anant Madabhushi, Parvin Mousavi, Septimiu Salcudean, James Duncan, Tanveer Syeda-Mahmood, Russell Taylor (ed.): Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2023
DOI: 10.1007/978-3-031-43901-8_7
BibTeX: Download
Ma Q., Li L., Kyriakopoulou V., Hajnal JV., Robinson EC., Kainz B., Rueckert D.:
Conditional Temporal Attention Networks for Neonatal Cortical Surface Reconstruction
26th International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2023 (Vancouver, BC, 08/10/2023 - 12/10/2023)
In: Hayit Greenspan, Hayit Greenspan, Anant Madabhushi, Parvin Mousavi, Septimiu Salcudean, James Duncan, Tanveer Syeda-Mahmood, Russell Taylor (ed.): Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2023
DOI: 10.1007/978-3-031-43901-8_30
BibTeX: Download
Müller J., Baugh M., Tan J., Dombrowski M., Kainz B.:
Confidence-Aware and Self-supervised Image Anomaly Localisation
Uncertainty for Safe Utilization of Machine Learning in Medical Imaging (Vancouver, 12/10/2023 - 12/10/2023)
In: Carole H. Sudre, Christian F. Baumgartner, Adrian Dalca, Raghav Mehta, Chen Qin, William M. Wells (ed.): Uncertainty for Safe Utilization of Machine Learning in Medical Imaging 2023
DOI: 10.1007/978-3-031-44336-7_18
BibTeX: Download
Oppenheimer J., Mandegaran R., Staabs F., Adler A., Singöhl S., Kainz B., Heinrich M., Geroulakos G., Spiliopoulos S., Avgerinos E.:
Remote Expert DVT Triaging of Novice-User Compression Sonography with AI-Guidance
In: Annals of Vascular Surgery (2023)
ISSN: 0890-5096
DOI: 10.1016/j.avsg.2023.08.022
BibTeX: Download
Reynaud H., Qiao M., Dombrowski M., Day T., Razavi R., Gomez A., Leeson P., Kainz B.:
Feature-Conditioned Cascaded Video Diffusion Models for Precise Echocardiogram Synthesis
26th International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2023 (Vancouver, BC, 08/10/2023 - 12/10/2023)
In: Hayit Greenspan, Hayit Greenspan, Anant Madabhushi, Parvin Mousavi, Septimiu Salcudean, James Duncan, Tanveer Syeda-Mahmood, Russell Taylor (ed.): Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2023
DOI: 10.1007/978-3-031-43999-5_14
BibTeX: Download
Sarapata G., Dushin Y., Morinan G., Ong J., Budhdeo S., Kainz B., O'Keeffe J.:
Video-Based Activity Recognition for Automated Motor Assessment of Parkinson's Disease
In: IEEE Journal of Biomedical and Health Informatics 27 (2023), p. 5032-5041
ISSN: 2168-2194
DOI: 10.1109/JBHI.2023.3298530
BibTeX: Download
Schmidtke L., Hou B., Vlontzos A., Kainz B.:
Self-supervised 3D Human Pose Estimation in Static Video via Neural Rendering
17th European Conference on Computer Vision, ECCV 2022 (Tel Aviv, ISR, 23/10/2022 - 27/10/2022)
In: Leonid Karlinsky, Tomer Michaeli, Ko Nishino (ed.): Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2023
DOI: 10.1007/978-3-031-25066-8_42
BibTeX: Download
Shkëmbi G., Müller J., Li Z., Breininger K., Schüffler P., Kainz B.:
Whole Slide Multiple Instance Learning for Predicting Axillary Lymph Node Metastasis
1st MICCAI Workshop on Data Engineering in Medical Imaging, DEMI 2023 (Vancouver, BC, 08/10/2023 - 08/10/2023)
In: Binod Bhattarai, Sharib Ali, Anita Rau, Anh Nguyen, Ana Namburete, Razvan Caramalau, Danail Stoyanov (ed.): Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2023
DOI: 10.1007/978-3-031-44992-5_2
BibTeX: Download
Vlontzos A., Kainz B., Gilligan-Lee CM.:
Estimating categorical counterfactuals via deep twin networks
In: Nature Machine Intelligence 5 (2023), p. 159-168
ISSN: 2522-5839
DOI: 10.1038/s42256-023-00611-x
BibTeX: Download
Zhang W., Basaran B., Meng Q., Baugh M., Stelter J., Lung P., Patel U., Bai W., Karampinos D., Kainz B.:
MoCoSR: Respiratory Motion Correction and Super-Resolution for 3D Abdominal MRI
26th International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2023 (Vancouver, BC, 08/10/2023 - 12/10/2023)
In: Hayit Greenspan, Anant Madabhushi, Parvin Mousavi, Septimiu Salcudean, James Duncan, Tanveer Syeda-Mahmood, Russell Taylor (ed.): Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2023
DOI: 10.1007/978-3-031-43999-5_12
BibTeX: Download
Zimmer VA., Gomez A., Skelton E., Wright R., Wheeler G., Deng S., Ghavami N., Lloyd K., Matthew J., Kainz B., Rueckert D., Hajnal JV., Schnabel JA.:
Placenta segmentation in ultrasound imaging: Addressing sources of uncertainty and limited field-of-view
In: Medical Image Analysis 83 (2023), Article No.: 102639
ISSN: 1361-8415
DOI: 10.1016/j.media.2022.102639
BibTeX: Download

2022

Baugh M., Tan J., Vlontzos A., Müller J., Kainz B.:
nnOOD: A Framework for Benchmarking Self-supervised Anomaly Localisation Methods
4th Workshop on Uncertainty for Safe Utilization of Machine Learning in Medical Imaging, UNSURE 2022, held in conjunction with 25th International Conference on Medical Image Computing and Computer Assisted Intervention, MICCAI 2022 (Singapore, SGP, 18/09/2022 - 18/09/2022)
In: Carole H. Sudre, Carole H. Sudre, Christian F. Baumgartner, Adrian Dalca, Adrian Dalca, William M. Wells III, Chen Qin, Ryutaro Tanno, Koen Van Leemput, Koen Van Leemput, William M. Wells III (ed.): Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2022
DOI: 10.1007/978-3-031-16749-2_10
BibTeX: Download
Gomez A., Zimmer VA., Wheeler G., Toussaint N., Deng S., Wright R., Skelton E., Matthew J., Kainz B., Hajnal J., Schnabel J.:
PRETUS: A plug-in based platform for real-time ultrasound imaging research
In: SoftwareX 17 (2022), Article No.: 100959
ISSN: 2352-7110
DOI: 10.1016/j.softx.2021.100959
BibTeX: Download
Grzech D., Azampour MF., Glocker B., Schnabel J., Navab N., Kainz B., Folgoc LL.:
A variational Bayesian method for similarity learning in non-rigid image registration
2022 IEEE/CVF Conference on Computer Vision and Pattern Recognition, CVPR 2022 (New Orleans, LA, 19/06/2022 - 24/06/2022)
In: Proceedings of the IEEE Computer Society Conference on Computer Vision and Pattern Recognition 2022
DOI: 10.1109/CVPR52688.2022.00022
BibTeX: Download
Liu T., Meng Q., Huang J.J., Vlontzos A., Rueckert D., Kainz B.:
Video Summarization Through Reinforcement Learning with a 3D Spatiooral U-Net
In: IEEE Transactions on Image Processing 31 (2022), p. 1573-1586
ISSN: 1057-7149
DOI: 10.1109/TIP.2022.3143699
BibTeX: Download
Lebbos C., Barcroft J., Tan J., Müller J., Baugh M., Vlontzos A., Saso S., Kainz B.:
Adnexal Mass Segmentation with Ultrasound Data Synthesis
3rd International Workshop of Advances in Simplifying Medical Ultrasound, ASMUS 2022, held in Conjunction with 25th International Conference on Medical Image Computing and Computer Assisted Intervention, MICCAI 2022 (Singapore, SGP, 18/09/2022 - 18/09/2022)
In: Stephen Aylward, J. Alison Noble, Yipeng Hu, Su-Lin Lee, Zachary Baum, Zhe Min (ed.): Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2022
DOI: 10.1007/978-3-031-16902-1_11
BibTeX: Download
Li L., Ma Q., Li Z., Ouyang C., Zhang W., Price A., Kyriakopoulou V., Grande LC., Makropoulos A., Hajnal J., Rueckert D., Kainz B., Alansary A.:
Fetal Cortex Segmentation with Topology and Thickness Loss Constraints
1st Workshop on Ethical and Philosop Issues in Med Imaging (EPIMI) / 12th Int Workshop on Multimodal Learning and Fus Across Scales for Clin Decis Support (ML-CDS) / 2nd Int Workshop on Topol Data Anal for Biomed Imaging (TDA4BiomedicalImaging) (Singapore, SINGAPORE)
In: ETHICAL AND PHILOSOPHICAL ISSUES IN MEDICAL IMAGING, MULTIMODAL LEARNING AND FUSION ACROSS SCALES FOR CLINICAL DECISION SUPPORT, AND TOPOLOGICAL DATA ANALYSIS FOR BIOMEDICAL IMAGING, EPIMI 2022, ML-CDS 2022, TDA4BIOMEDICALIMAGING, CHAM: 2022
DOI: 10.1007/978-3-031-23223-7_11
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Liu T., Meng Q., Huang JJ., Vlontzos A., Rueckert D., Kainz B.:
Video Summarization Through Reinforcement Learning with a 3D Spatiooral U-Net
In: IEEE Transactions on Image Processing 31 (2022), p. 1573-1586
ISSN: 1057-7149
DOI: 10.1109/TIP.2022.3143699
BibTeX: Download
Matthew J., Skelton E., Day TG., Zimmer VA., Gomez A., Wheeler G., Toussaint N., Liu T., Budd S., Lloyd K., Wright R., Deng S., Ghavami N., Sinclair M., Meng Q., Kainz B., Schnabel JA., Rueckert D., Razavi R., Simpson J., Hajnal J.:
Exploring a new paradigm for the fetal anomaly ultrasound scan: Artificial intelligence in real time
In: Prenatal Diagnosis 42 (2022), p. 49-59
ISSN: 0197-3851
DOI: 10.1002/pd.6059
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Ouyang C., Wang S., Chen C., Li Z., Bai W., Kainz B., Rueckert D.:
Improved Post-hoc Probability Calibration for Out-of-Domain MRI Segmentation
4th Workshop on Uncertainty for Safe Utilization of Machine Learning in Medical Imaging, UNSURE 2022, held in conjunction with 25th International Conference on Medical Image Computing and Computer Assisted Intervention, MICCAI 2022 (Singapore, 18/09/2022 - 18/09/2022)
In: Carole H. Sudre, Carole H. Sudre, Christian F. Baumgartner, Adrian Dalca, Adrian Dalca, William M. Wells III, Chen Qin, Ryutaro Tanno, Koen Van Leemput, Koen Van Leemput, William M. Wells III (ed.): Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2022
DOI: 10.1007/978-3-031-16749-2_6
BibTeX: Download
Reynaud H., Vlontzos A., Dombrowski M., Gilligan Lee C., Beqiri A., Leeson P., Kainz B.:
D’ARTAGNAN: Counterfactual Video Generation
25th International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2022 (Singapore, 18/09/2022 - 22/09/2022)
In: Linwei Wang, Qi Dou, P. Thomas Fletcher, Stefanie Speidel, Shuo Li (ed.): Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2022
DOI: 10.1007/978-3-031-16452-1_57
BibTeX: Download
Schlüter HM., Tan J., Hou B., Kainz B.:
Natural Synthetic Anomalies for Self-supervised Anomaly Detection and Localization
17th European Conference on Computer Vision, ECCV 2022 (Tel Aviv, 23/10/2022 - 27/10/2022)
In: Shai Avidan, Gabriel Brostow, Moustapha Cissé, Giovanni Maria Farinella, Tal Hassner (ed.): Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2022
DOI: 10.1007/978-3-031-19821-2_27
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Tan J., Kart T., Hou B., Batten J., Kainz B.:
MetaDetector: Detecting Outliers by Learning to Learn from Self-supervision
24th International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2021 (Strasbourg, FRA, 27/09/2021 - 01/10/2021)
In: Marc Aubreville, David Zimmerer, Mattias Heinrich (ed.): Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2022
DOI: 10.1007/978-3-030-97281-3_18
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Zimmerer D., Full PM., Isensee F., Jaeger P., Adler T., Petersen J., Koehler G., Ross T., Reinke A., Kascenas A., Jensen BS., O'Neil AQ., Tan J., Hou B., Batten J., Qiu H., Kainz B., Shvetsova N., Fedulova I., Dylov D., Yu B., Zhai J., Hu J., Si R., Zhou S., Wang S., Li X., Chen X., Zhao Y., Marimont SN., Tarroni G., Saase V., Maier-Hein L., Maier-Hein K.:
MOOD 2020: A Public Benchmark for Out-of-Distribution Detection and Localization on Medical Images
In: IEEE Transactions on Medical Imaging 41 (2022), p. 2728-2738
ISSN: 0278-0062
DOI: 10.1109/TMI.2022.3170077
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2021

Budd S., Day TG., Simpson JM., Lloyd K., Matthew J., Skelton E., Razavi R., Kainz B.:
Can Non-specialists Provide High Quality Gold Standard Labels in Challenging Modalities?
Springer Science and Business Media Deutschland GmbH, 2021
ISBN: 9783030877217
DOI: 10.1007/978-3-030-87722-4_23
BibTeX: Download
Budd S., Robinson EC., Kainz B.:
A survey on active learning and human-in-the-loop deep learning for medical image analysis
In: Medical Image Analysis 71 (2021), Article No.: 102062
ISSN: 1361-8415
DOI: 10.1016/j.media.2021.102062
BibTeX: Download
Budd S., Sinclair M., Day TG., Vlontzos A., Tan J., Liu T., Matthew J., Skelton E., Simpson JM., Razavi R., Glocker B., Rueckert D., Robinson EC., Kainz B.:
Detecting Hypo-plastic Left Heart Syndrome in Fetal Ultrasound via Disease-Specific Atlas Maps
Springer Science and Business Media Deutschland GmbH, 2021
ISBN: 9783030872335
DOI: 10.1007/978-3-030-87234-2_20
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Day TG., Kainz B., Hajnal J., Razavi R., Simpson JM.:
Artificial intelligence, fetal echocardiography, and congenital heart disease
In: Prenatal Diagnosis 41 (2021), p. 733-742
ISSN: 0197-3851
DOI: 10.1002/pd.5892
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Dou Q., So TY., Jiang M., Liu Q., Vardhanabhuti V., Kaissis G., Li Z., Si W., Lee HHC., Yu K., Feng Z., Dong L., Burian E., Jungmann F., Braren R., Makowski M., Kainz B., Rueckert D., Glocker B., Yu SCH., Heng PA.:
Federated deep learning for detecting COVID-19 lung abnormalities in CT: a privacy-preserving multinational validation study
In: npj Digital Medicine 4 (2021), Article No.: 60
ISSN: 2398-6352
DOI: 10.1038/s41746-021-00431-6
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Hou B., Kaissis G., Summers R., Kainz B.:
RATCHET: Medical Transformer for Chest X-ray Diagnosis and Reporting
Springer Science and Business Media Deutschland GmbH, 2021
ISBN: 9783030872335
DOI: 10.1007/978-3-030-87234-2_28
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Jiang G., Kainz B.:
Deep radiance caching: Convolutional autoencoders deeper in ray tracing
In: Computers & Graphics 94 (2021), p. 22-31
ISSN: 0097-8493
DOI: 10.1016/j.cag.2020.09.007
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Li L., Sinclair M., Makropoulos A., Hajnal J.V., David Edwards A., Kainz B., Rueckert D., Alansary A.:
CAS-Net: Conditional Atlas Generation and Brain Segmentation for Fetal MRI
3rd International Workshop on Uncertainty for Safe Utilization of Machine Learning in Medical Imaging, UNSURE 2021, and the 6th International Workshop on Perinatal, Preterm and Paediatric Image Analysis, PIPPI 2021, held in conjunction with the 24th International Conference on Medical Image Computing and Computer Assisted Intervention, MICCAI 2021
DOI: 10.1007/978-3-030-87735-4_21
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Chartsias A., Gao S., Mumith A., Oliveira J., Bhatia K., Kainz B., Beqiri A.:
Contrastive Learning for View Classification of Echocardiograms
Springer Science and Business Media Deutschland GmbH, 2021
ISBN: 9783030875824
DOI: 10.1007/978-3-030-87583-1_15
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Ma Q., Robinson E.C., Kainz B., Rueckert D., Alansary A.:
PialNN: A Fast Deep Learning Framework for Cortical Pial Surface Reconstruction
Springer Science and Business Media Deutschland GmbH, 2021
ISBN: 9783030875855
DOI: 10.1007/978-3-030-87586-2_8
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Kainz B., Heinrich MP., Makropoulos A., Oppenheimer J., Mandegaran R., Sankar S., Deane C., Mischkewitz S., Al-Noor F., Rawdin AC., Ruttloff A., Klein-Weigel PF., Stevenson MD., Curry N.:
Non-invasive diagnosis of deep vein thrombosis from ultrasound imaging with machine learning
In: npj Digital Medicine 4 (2021), p. 1-20
ISSN: 2398-6352
DOI: 10.1038/s41746-021-00503-7
URL: https://www.nature.com/articles/s41746-021-00503-7.pdf
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Meng Q., Matthew J., Zimmer VA., Gomez A., Lloyd DFA., Rueckert D., Kainz B.:
Mutual Information-Based Disentangled Neural Networks for Classifying Unseen Categories in Different Domains: Application to Fetal Ultrasound Imaging
In: IEEE Transactions on Medical Imaging 40 (2021), p. 722-734
ISSN: 0278-0062
DOI: 10.1109/TMI.2020.3035424
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Reynaud H., Vlontzos A., Hou B., Beqiri A., Leeson P., Kainz B.:
Ultrasound Video Transformers for Cardiac Ejection Fraction Estimation
Springer Science and Business Media Deutschland GmbH, 2021
ISBN: 9783030872304
DOI: 10.1007/978-3-030-87231-1_48
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Schmidtke L., Vlontzos A., Ellershaw S., Lukens A., Arichi T., Kainz B.:
Unsupervised Human Pose Estimation through Transforming Shape Templates
2021 IEEE/CVF Conference on Computer Vision and Pattern Recognition, CVPR 2021 (Virtual, Online, USA, 19/06/2021 - 25/06/2021)
In: Proceedings of the IEEE Computer Society Conference on Computer Vision and Pattern Recognition 2021
DOI: 10.1109/CVPR46437.2021.00251
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Skelton E., Matthew J., Li Y., Khanal B., Martinez JJC., Toussaint N., Gupta C., Knight C., Kainz B., Hajnal JV., Rutherford M.:
Towards automated extraction of 2D standard fetal head planes from 3D ultrasound acquisitions: A clinical evaluation and quality assessment comparison
In: Radiography 27 (2021), p. 519-526
ISSN: 1078-8174
DOI: 10.1016/j.radi.2020.11.006
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Tan J., Hou B., Day TG., Simpson JM., Rueckert D., Kainz B.:
Detecting Outliers with Poisson Image Interpolation
Springer Science and Business Media Deutschland GmbH, 2021
ISBN: 9783030872397
DOI: 10.1007/978-3-030-87240-3_56
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2020

Budd S., Patkee P., Baburamani A., Rutherford M., Robinson EC., Kainz B.:
Surface Agnostic Metrics for Cortical Volume Segmentation and Regression
3rd International Workshop on Machine Learning in Clinical Neuroimaging, MLCN 2020, and 2nd International Workshop on Radiogenomics in Neuro-oncology, RNO-AI 2020, held in conjunction with MICCAI 2020 (Lima, PER, 04/10/2020 - 08/10/2020)
In: Seyed Mostafa Kia, Hassan Mohy-ud-Din, Ahmed Abdulkadir, Cher Bass, Mohamad Habes, Jane Maryam Rondina, Chantal Tax, Hongzhi Wang, Thomas Wolfers, Saima Rathore, Madhura Ingalhalikar (ed.): Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2020
DOI: 10.1007/978-3-030-66843-3_1
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Grzech D., Kainz B., Glocker B., le Folgoc L.:
Image Registration via Stochastic Gradient Markov Chain Monte Carlo
2nd International Workshop on Uncertainty for Safe Utilization of Machine Learning in Medical Imaging, UNSURE 2020, and the 3rd International Workshop on Graphs in Biomedical Image Analysis, GRAIL 2020, held in conjunction with the 23rd International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2020 (Lima, PER, 08/10/2020 - 08/10/2020)
In: Carole H. Sudre, Hamid Fehri, Tal Arbel, Christian F. Baumgartner, Adrian Dalca, Ryutaro Tanno, Koen Van Leemput, William M. Wells, Aristeidis Sotiras, Bartlomiej Papiez, Enzo Ferrante, Sarah Parisot (ed.): Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2020
DOI: 10.1007/978-3-030-60365-6_1
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Hinterreiter A., Streit M., Kainz B.:
Projective Latent Interventions for Understanding and Fine-Tuning Classifiers
3rd International Workshop on Interpretability of Machine Intelligence in Medical Image Computing, iMIMIC 2020, the 2nd International Workshop on Medical Image Learning with Less Labels and Imperfect Data, MIL3ID 2020, and the 5th International Workshop on Large-scale Annotation of Biomedical data and Expert Label Synthesis, LABELS 2020, held in conjunction with the 23rd International Conference on Medical Image Computing and Computer Assisted Intervention, MICCAI 2020 (Lima, PER, 04/10/2020 - 08/10/2020)
In: Jaime Cardoso, Wilson Silva, Ricardo Cruz, Hien Van Nguyen, Badri Roysam, Nicholas Heller, Pedro Henriques Abreu, Jose Pereira Amorim, Ivana Isgum, Vishal Patel, Kevin Zhou, Steve Jiang, Ngan Le, Khoa Luu, Raphael Sznitman, Veronika Cheplygina, Samaneh Abbasi, Diana Mateus, Emanuele Trucco (ed.): Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2020
DOI: 10.1007/978-3-030-61166-8_2
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Liu T., Meng Q., Vlontzos A., Tan J., Rueckert D., Kainz B.:
Ultrasound Video Summarization Using Deep Reinforcement Learning
23rd International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2020 (Lima, PER, 04/10/2020 - 08/10/2020)
In: Anne L. Martel, Purang Abolmaesumi, Danail Stoyanov, Diana Mateus, Maria A. Zuluaga, S. Kevin Zhou, Daniel Racoceanu, Leo Joskowicz (ed.): Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2020
DOI: 10.1007/978-3-030-59716-0_46
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Meng Q., Rueckert D., Kainz B.:
Unsupervised Cross-domain Image Classification by Distance Metric Guided Feature Alignment
1st International Workshop on Advances in Simplifying Medical UltraSound, ASMUS 2020, and the 5th International Workshop on Perinatal, Preterm and Paediatric Image Analysis, PIPPI 2020, held in conjunction with the 23rd International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2020 (Lima, PER, 04/10/2020 - 08/10/2020)
In: Yipeng Hu, Roxane Licandro, J. Alison Noble, Jana Hutter, Andrew Melbourne, Stephen Aylward, Esra Abaci Turk, Jordina Torrents Barrena, Jordina Torrents Barrena (ed.): Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2020
DOI: 10.1007/978-3-030-60334-2_15
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Miolane N., Guigui N., Le Brigant A., Mathe J., Hou B., Thanwerdas Y., Heyder S., Peltre O., Koep N., Zaatiti H., Hajri H., Cabanes Y., Gerald T., Chauchat P., Shewmake C., Brooks D., Kainz B., Donnat C., Holmes S., Pennec X.:
Geomstats: A python package for riemannian geometry in machine learning
In: Journal of Machine Learning Research 21 (2020)
ISSN: 1532-4435
BibTeX: Download
Tan J., Au A., Meng Q., FinesilverSmith S., Simpson J., Rueckert D., Razavi R., Day T., Lloyd D., Kainz B.:
Automated Detection of Congenital Heart Disease in Fetal Ultrasound Screening
1st International Workshop on Advances in Simplifying Medical UltraSound, ASMUS 2020, and the 5th International Workshop on Perinatal, Preterm and Paediatric Image Analysis, PIPPI 2020, held in conjunction with the 23rd International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2020 (Lima, PER, 04/10/2020 - 08/10/2020)
In: Yipeng Hu, Roxane Licandro, J. Alison Noble, Jana Hutter, Andrew Melbourne, Stephen Aylward, Esra Abaci Turk, Jordina Torrents Barrena, Jordina Torrents Barrena (ed.): Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2020
DOI: 10.1007/978-3-030-60334-2_24
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Tan J., Kainz B.:
Divergent search for image classification behaviors
2020 Genetic and Evolutionary Computation Conference, GECCO 2020 (Cancun, MEX, 08/07/2020 - 12/07/2020)
In: GECCO 2020 Companion - Proceedings of the 2020 Genetic and Evolutionary Computation Conference Companion 2020
DOI: 10.1145/3377929.3389973
BibTeX: Download
Vlontzos A., Budd S., Hou B., Rueckert D., Kainz B.:
3D Probabilistic Segmentation and Volumetry from 2D Projection Images
2nd International Workshop on Thoracic Image Analysis, TIA 2020 Held in Conjunction with Medical Image Computing and Computer-Assisted Intervention Conference, MICCAI 2020 (Lima, PER, 08/10/2020 - 08/10/2020)
In: Jens Petersen, Raúl San José Estépar, Alexander Schmidt-Richberg, Sarah Gerard, Bianca Lassen-Schmidt, Colin Jacobs, Reinhard Beichel, Kensaku Mori (ed.): Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2020
DOI: 10.1007/978-3-030-62469-9_5
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2019

Alansary A., Oktay O., Li Y., Le Folgoc L., Hou B., Vaillant G., Kamnitsas K., Vlontzos A., Glocker B., Kainz B., Rueckert D.:
Evaluating reinforcement learning agents for anatomical landmark detection
In: Medical Image Analysis 53 (2019), p. 156-164
ISSN: 1361-8415
DOI: 10.1016/j.media.2019.02.007
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Budd S., Sinclair M., Khanal B., Matthew J., Lloyd D., Gomez A., Toussaint N., Robinson EC., Kainz B.:
Confident head circumference measurement from ultrasound with real-time feedback for sonographers
22nd International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2019 (Shenzhen, CHN, 13/10/2019 - 17/10/2019)
In: Dinggang Shen, Pew-Thian Yap, Tianming Liu, Terry M. Peters, Ali Khan, Lawrence H. Staib, Caroline Essert, Sean Zhou (ed.): Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2019
DOI: 10.1007/978-3-030-32251-9_75
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Castro DC., Tan J., Kainz B., Konukoglu E., Glocker B.:
Morpho-Mnist: Quantitative assessment and diagnostics for representation learning
In: Journal of Machine Learning Research 20 (2019)
ISSN: 1532-4435
BibTeX: Download
Chotzoglou E., Kainz B.:
Exploring the relationship between segmentation uncertainty, segmentation performance and inter-observer variability with probabilistic networks
4th International Workshop on Large-Scale Annotation of Biomedical Data and Expert Label Synthesis, LABELS 2019, the 1st International Workshop on Hardware Aware Learning for Medical Imaging and Computer Assisted Intervention, HAL-MICCAI 2019, and the 2nd International Workshop on Correction of Brainshift with Intra-Operative Ultrasound, CuRIOUS 2019, held in conjunction with the 22nd International Conference on Medical Imaging and Computer-Assisted Intervention, MICCAI 2019 (Shenzhen, CHN, 17/10/2019 - 17/10/2019)
In: Luping Zhou, Nicholas Heller, Yiyu Shi, Danny Chen, X. Sharon Hu, Yiming Xiao, Raphael Sznitman, Veronika Cheplygina, Diana Mateus, Emanuele Trucco, Matthieu Chabanas, Hassan Rivaz, Ingerid Reinertsen (ed.): Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2019
DOI: 10.1007/978-3-030-33642-4_6
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Holland R., Patel U., Lung P., Chotzoglou E., Kainz B.:
Automatic detection of bowel disease with residual networks
2nd International Workshop on Predictive Intelligence in Medicine, PRIME 2019, held in conjunction with the 22nd International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2019 (Shenzhen, CHN, 13/10/2019 - 13/10/2019)
In: Islem Rekik, Ehsan Adeli, Sang Hyun Park (ed.): Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2019
DOI: 10.1007/978-3-030-32281-6_16
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Hou B., Vlontzos A., Alansary A., Rueckert D., Kainz B.:
Flexible Conditional Image Generation of Missing Data with Learned Mental Maps
2nd International Workshop on Machine Learning for Medical Image Reconstruction, MLMIR 2019 held in Conjunction with 22nd International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2019 (Shenzhen, CHN, 17/10/2019 - 17/10/2019)
In: Florian Knoll, Andreas Maier, Daniel Rueckert, Jong Chul Ye (ed.): Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2019
DOI: 10.1007/978-3-030-33843-5_13
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Lloyd DF., Pushparajah K., Simpson JM., van Amerom JF., van Poppel MP., Schulz A., Kainz B., Deprez M., Lohezic M., Allsop J., Mathur S., Bellsham-Revell H., Vigneswaran T., Charakida M., Miller O., Zidere V., Sharland G., Rutherford M., Hajnal JV., Razavi R.:
Three-dimensional visualisation of the fetal heart using prenatal MRI with motion-corrected slice-volume registration: a prospective, single-centre cohort study
In: Lancet 393 (2019), p. 1619-1627
ISSN: 0140-6736
DOI: 10.1016/S0140-6736(18)32490-5
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Meng Q., Pawlowski N., Rueckert D., Kainz B.:
Representation disentanglement for multi-task learning with application to fetal ultrasound
1st International Workshop on Smart Ultrasound Imaging, SUSI 2019, and the 4th International Workshop on Preterm, Perinatal and Paediatric Image Analysis, PIPPI 2019, held in conjunction with the 22nd International Conference on Medical Imaging and Computer-Assisted Intervention, MICCAI 2019 (Shenzhen, CHN, 17/10/2019 - 17/10/2019)
In: Qian Wang, Alberto Gomez, Jana Hutter, Alberto Gomez, Veronika Zimmer, Jana Hutter, Emma Robinson, Daan Christiaens, Andrew Melbourne, Kristin McLeod, Oliver Zettinig, Roxane Licandro, Esra Abaci Turk (ed.): Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2019
DOI: 10.1007/978-3-030-32875-7_6
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Meng Q., Sinclair M., Zimmer V., Hou B., Rajchl M., Toussaint N., Oktay O., Schlemper J., Gomez A., Housden J., Matthew J., Rueckert D., Schnabel JA., Kainz B.:
Weakly Supervised Estimation of Shadow Confidence Maps in Fetal Ultrasound Imaging
In: IEEE Transactions on Medical Imaging 38 (2019), p. 2755-2767
ISSN: 0278-0062
DOI: 10.1109/TMI.2019.2913311
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Robinson R., Valindria VV., Bai W., Oktay O., Kainz B., Suzuki H., Sanghvi MM., Aung N., Paiva JM., Zemrak F., Fung K., Lukaschuk E., Lee AM., Carapella V., Kim YJ., Piechnik SK., Neubauer S., Petersen SE., Page C., Matthews PM., Rueckert D., Glocker B.:
Automated quality control in image segmentation: Application to the UK Biobank cardiovascular magnetic resonance imaging study
In: Journal of Cardiovascular Magnetic Resonance 21 (2019), Article No.: 18
ISSN: 1097-6647
DOI: 10.1186/s12968-019-0523-x
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Schlemper J., Oktay O., Schaap M., Heinrich M., Kainz B., Glocker B., Rueckert D.:
Attention gated networks: Learning to leverage salient regions in medical images
In: Medical Image Analysis 53 (2019), p. 197-207
ISSN: 1361-8415
DOI: 10.1016/j.media.2019.01.012
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Schultz T., Puig A., Kainz B.:
Foreword to the special section on the Eurographics Workshop on Visual Computing for Biology and Medicine (VCBM) at Medical Image Computing and Computer Assisted Intervention (MICCAI) 2018
In: Computers & Graphics 83 (2019), p. A5-A6
ISSN: 0097-8493
DOI: 10.1016/j.cag.2019.08.001
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Tan J., Au A., Meng Q., Kainz B.:
Semi-supervised learning of fetal anatomy from ultrasound
1st MICCAI Workshop on Domain Adaptation and Representation Transfer, DART 2019, and the 1st International Workshop on Medical Image Learning with Less Labels and Imperfect Data, MIL3ID 2019, held in conjunction with 22nd International Conference on Medical Image Computing and Computer- Assisted Intervention, MICCAI 2019 (Shenzhen, CHN, 13/10/2019 - 17/10/2019)
In: Qian Wang, Fausto Milletari, Nicola Rieke, Hien V. Nguyen, Badri Roysam, Shadi Albarqouni, M. Jorge Cardoso, Ziyue Xu, Konstantinos Kamnitsas, Vishal Patel, Steve Jiang, Kevin Zhou, Khoa Luu, Ngan Le (ed.): Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2019
DOI: 10.1007/978-3-030-33391-1_18
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Vlontzos A., Alansary A., Kamnitsas K., Rueckert D., Kainz B.:
Multiple landmark detection using multi-agent reinforcement learning
22nd International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2019 (Shenzhen, CHN, 13/10/2019 - 17/10/2019)
In: Dinggang Shen, Pew-Thian Yap, Tianming Liu, Terry M. Peters, Ali Khan, Lawrence H. Staib, Caroline Essert, Sean Zhou (ed.): Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2019
DOI: 10.1007/978-3-030-32251-9_29
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Wright R., Toussaint N., Gomez A., Zimmer V., Khanal B., Matthew J., Skelton E., Kainz B., Rueckert D., Hajnal JV., Schnabel JA.:
Complete Fetal Head Compounding from Multi-view 3D Ultrasound
22nd International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2019 (Shenzhen, CHN, 13/10/2019 - 17/10/2019)
In: Dinggang Shen, Pew-Thian Yap, Tianming Liu, Terry M. Peters, Ali Khan, Lawrence H. Staib, Caroline Essert, Sean Zhou (ed.): Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2019
DOI: 10.1007/978-3-030-32248-9_43
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2018

Alansary A., Le Folgoc L., Vaillant G., Oktay O., Li Y., Bai W., Passerat-Palmbach J., Guerrero R., Kamnitsas K., Hou B., Mcdonagh S., Glocker B., Kainz B., Rueckert D.:
Automatic view planning with multi-scale deep reinforcement learning agents
21st International Conference on Medical Image Computing and Computer Assisted Intervention, MICCAI 2018 (Granada, ESP, 16/09/2018 - 20/09/2018)
In: Julia A. Schnabel, Christos Davatzikos, Carlos Alberola-López, Gabor Fichtinger, Alejandro F. Frangi (ed.): Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2018
DOI: 10.1007/978-3-030-00928-1_32
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Bai W., Sinclair M., Tarroni G., Oktay O., Rajchl M., Vaillant G., Lee AM., Aung N., Lukaschuk E., Sanghvi MM., Zemrak F., Fung K., Paiva JM., Carapella V., Kim YJ., Suzuki H., Kainz B., Matthews PM., Petersen SE., Piechnik SK., Neubauer S., Glocker B., Rueckert D.:
Automated cardiovascular magnetic resonance image analysis with fully convolutional networks 08 Information and Computing Sciences 0801 Artificial Intelligence and Image Processing
In: Journal of Cardiovascular Magnetic Resonance 20 (2018), Article No.: 65
ISSN: 1097-6647
DOI: 10.1186/s12968-018-0471-x
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Cerrolaza JJ., Li Y., Biffi C., Gomez A., Sinclair M., Matthew J., Knight C., Kainz B., Rueckert D.:
3D fetal skull reconstruction from 2DUS via deep conditional generative networks
21st International Conference on Medical Image Computing and Computer Assisted Intervention, MICCAI 2018 (Granada, ESP, 16/09/2018 - 20/09/2018)
In: Julia A. Schnabel, Christos Davatzikos, Carlos Alberola-López, Gabor Fichtinger, Alejandro F. Frangi (ed.): Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2018
DOI: 10.1007/978-3-030-00928-1_44
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Hou B., Khanal B., Alansary A., Mcdonagh S., Davidson A., Rutherford M., Hajnal J., Rueckert D., Glocker B., Kainz B.:
3-D Reconstruction in Canonical Co-Ordinate Space from Arbitrarily Oriented 2-D Images
In: IEEE Transactions on Medical Imaging 37 (2018), p. 1737-1750
ISSN: 0278-0062
DOI: 10.1109/TMI.2018.2798801
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Hou B., Miolane N., Khanal B., Lee MCH., Alansary A., Mcdonagh S., Hajnal JV., Rueckert D., Glocker B., Kainz B.:
Computing CNN loss and gradients for pose estimation with Riemannian geometry
21st International Conference on Medical Image Computing and Computer Assisted Intervention, MICCAI 2018 (Granada, ESP, 16/09/2018 - 20/09/2018)
In: Julia A. Schnabel, Christos Davatzikos, Carlos Alberola-López, Gabor Fichtinger, Alejandro F. Frangi (ed.): Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2018
DOI: 10.1007/978-3-030-00928-1_85
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Kainz B., Bhatia K., Vercauteren T., Oktay O.:
RAMBO 2018 Preface
In: David Snead, Emanuele Trucco, Danail Stoyanov, Zeike Taylor, Lena Maier-Hein, Nasir Rajpoot, Hrvoje Bogunovic, Francesco Ciompi, Mitko Veta, Mona K. Garvin, Xin Jan Chen, Anne Martel, Jeroen van der Laak, Yanwu Xu, Stephen McKenna (ed.): Image Analysis for Moving Organ, Breast, and Thoracic Images - Third International Workshop, RAMBO 2018, Fourth International Workshop, BIA 2018, and First International Workshop, TIA 2018, Held in Conjunction with MICCAI 2018, Proceedings, Springer Verlag, 2018, p. VII- (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Vol.11040 LNCS)
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Lloyd DFA, van Poppel M, Schultz A, Pushparajah K, Simpson J, van Amerom JFP, Kainz B, Kuklisova-Murgasova M, Vigneswaran T, Charakida M, Miller O, Zidere V, Sharland G, Rutherford M, Hajnal J, Razavi R:
MOTION CORRECTED FETAL CARDIAC MRI INCREASES DIAGNOSTIC CONFIDENCE IN CLINICALLY CHALLENGING CASES
In: Heart 104 (2018), p. A11-A11
ISSN: 1355-6037
DOI: 10.1136/heartjnl-2017-BCCA.31
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Kamnitsas K., Bai W., Ferrante E., Mcdonagh S., Sinclair M., Pawlowski N., Rajchl M., Lee M., Kainz B., Rueckert D., Glocker B.:
Ensembles of multiple models and architectures for robust brain tumour segmentation
3rd International Workshop on Brainlesion, BrainLes 2017 Held in Conjunction with Medical Image Computing for Computer Assisted Intervention , MICCAI 2017 (Quebec City, QC, CAN, 14/09/2017 - 14/09/2017)
In: Bjoern Menze, Alessandro Crimi, Hugo Kuijf, Mauricio Reyes, Spyridon Bakas (ed.): Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2018
DOI: 10.1007/978-3-319-75238-9_38
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Khanal B., Gomez A., Toussaint N., Mcdonagh S., Zimmer V., Skelton E., Matthew J., Grzech D., Wright R., Gupta C., Hou B., Rueckert D., Schnabel JA., Kainz B.:
EchoFusion: Tracking and reconstruction of objects in 4D freehand ultrasound imaging without external trackers
1st International Workshop on Data Driven Treatment Response Assessment, DATRA 2018 and 3rd International Workshop on Preterm, Perinatal, and Paediatric Image Analysis, PIPPI 2018 Held in Conjunction with 21st International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2018 (Granada, ESP, 16/09/2018 - 16/09/2018)
In: Andrew Melbourne, Rosalind Aughwane, Emma Robinson, Roxane Licandro, Melanie Gau, Martin Kampel, Matthew DiFranco, Paolo Rota, Roxane Licandro, Pim Moeskops, Ernst Schwartz, Antonios Makropoulos (ed.): Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2018
DOI: 10.1007/978-3-030-00807-9_12
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Li Y., Alansary A., Cerrolaza JJ., Khanal B., Sinclair M., Matthew J., Gupta C., Knight C., Kainz B., Rueckert D.:
Fast multiple landmark localisation using a patch-based iterative network
21st International Conference on Medical Image Computing and Computer Assisted Intervention, MICCAI 2018 (Granada, ESP, 16/09/2018 - 20/09/2018)
In: Julia A. Schnabel, Christos Davatzikos, Carlos Alberola-López, Gabor Fichtinger, Alejandro F. Frangi (ed.): Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2018
DOI: 10.1007/978-3-030-00928-1_64
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Li Y., Khanal B., Hou B., Alansary A., Cerrolaza JJ., Sinclair M., Matthew J., Gupta C., Knight C., Kainz B., Rueckert D.:
Standard plane detection in 3D fetal ultrasound using an iterative transformation network
21st International Conference on Medical Image Computing and Computer Assisted Intervention, MICCAI 2018 (Granada, ESP, 16/09/2018 - 20/09/2018)
In: Julia A. Schnabel, Christos Davatzikos, Carlos Alberola-López, Gabor Fichtinger, Alejandro F. Frangi (ed.): Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2018
DOI: 10.1007/978-3-030-00928-1_45
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Meng Q., Baumgartner C., Sinclair M., Housden J., Rajchl M., Gomez A., Hou B., Toussaint N., Zimmer V., Tan J., Matthew J., Rueckert D., Schnabel J., Kainz B.:
Automatic shadow detection in 2D ultrasound images
1st International Workshop on Data Driven Treatment Response Assessment, DATRA 2018 and 3rd International Workshop on Preterm, Perinatal, and Paediatric Image Analysis, PIPPI 2018 Held in Conjunction with 21st International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2018 (Granada, ESP, 16/09/2018 - 16/09/2018)
In: Andrew Melbourne, Rosalind Aughwane, Emma Robinson, Roxane Licandro, Melanie Gau, Martin Kampel, Matthew DiFranco, Paolo Rota, Roxane Licandro, Pim Moeskops, Ernst Schwartz, Antonios Makropoulos (ed.): Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2018
DOI: 10.1007/978-3-030-00807-9_7
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Oktay O., Ferrante E., Kamnitsas K., Heinrich M., Bai W., Caballero J., Cook SA., De Marvao A., Dawes T., O'Regan DP., Kainz B., Glocker B., Rueckert D.:
Anatomically Constrained Neural Networks (ACNNs): Application to Cardiac Image Enhancement and Segmentation
In: IEEE Transactions on Medical Imaging 37 (2018), p. 384-395
ISSN: 0278-0062
DOI: 10.1109/TMI.2017.2743464
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Robinson R., Oktay O., Bai W., Valindria VV., Sanghvi MM., Aung N., Paiva JM., Zemrak F., Fung K., Lukaschuk E., Lee AM., Carapella V., Kim YJ., Kainz B., Piechnik SK., Neubauer S., Petersen SE., Page C., Rueckert D., Glocker B.:
Real-Time Prediction of Segmentation Quality
21st International Conference on Medical Image Computing and Computer Assisted Intervention, MICCAI 2018 (Granada, ESP, 16/09/2018 - 20/09/2018)
In: Alejandro F. Frangi, Gabor Fichtinger, Julia A. Schnabel, Carlos Alberola-López, Christos Davatzikos (ed.): Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2018
DOI: 10.1007/978-3-030-00937-3_66
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Sinclair M., Baumgartner CF., Matthew J., Bai W., Martinez JC., Li Y., Smith S., Knight CL., Kainz B., Hajnal J., King AP., Rueckert D.:
Human-level Performance on Automatic Head Biometrics in Fetal Ultrasound Using Fully Convolutional Neural Networks
40th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2018 (Honolulu, HI, USA, 18/07/2018 - 21/07/2018)
In: Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS 2018
DOI: 10.1109/EMBC.2018.8512278
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Tanno R., Makropoulos A., Arslan S., Oktay O., Mischkewitz S., Al-Noor F., Oppenheimer J., Mandegaran R., Kainz B., Heinrich MP.:
AutoDVT: Joint real-time classification for vein compressibility analysis in deep vein thrombosis ultrasound diagnostics
21st International Conference on Medical Image Computing and Computer Assisted Intervention, MICCAI 2018 (Granada, ESP, 16/09/2018 - 20/09/2018)
In: Gabor Fichtinger, Christos Davatzikos, Carlos Alberola-López, Alejandro F. Frangi, Julia A. Schnabel (ed.): Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2018
DOI: 10.1007/978-3-030-00934-2_100
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Verbruggen SW., Kainz B., Shelmerdine SC., Arthurs OJ., Hajnal JV., Rutherford MA., Phillips ATM., Nowlan NC.:
Altered biomechanical stimulation of the developing hip joint in presence of hip dysplasia risk factors
In: Journal of Biomechanics 78 (2018), p. 1-9
ISSN: 0021-9290
DOI: 10.1016/j.jbiomech.2018.07.016
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Verbruggen SW., Kainz B., Shelmerdine SC., Hajnal JV., Rutherford MA., Arthurs OJ., Phillips ATM., Nowlan NC.:
Stresses and strains on the human fetal skeleton during development
In: Journal of the Royal Society Interface 15 (2018), Article No.: 20170593
ISSN: 1742-5689
DOI: 10.1098/rsif.2017.0593
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2017

Alansary A., Rajchl M., Mcdonagh SG., Murgasova M., Damodaram M., Lloyd DFA., Davidson A., Rutherford M., Hajnal JV., Rueckert D., Kainz B.:
PVR: Patch-to-Volume Reconstruction for Large Area Motion Correction of Fetal MRI
In: IEEE Transactions on Medical Imaging 36 (2017), p. 2031-2044
ISSN: 0278-0062
DOI: 10.1109/TMI.2017.2737081
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Baumgartner CF., Kamnitsas K., Matthew J., Fletcher TP., Smith S., Koch LM., Kainz B., Rueckert D.:
SonoNet: Real-Time Detection and Localisation of Fetal Standard Scan Planes in Freehand Ultrasound
In: IEEE Transactions on Medical Imaging 36 (2017), p. 2204-2215
ISSN: 0278-0062
DOI: 10.1109/TMI.2017.2712367
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Cerrolaza JJ., Oktay O., Gomez A., Matthew J., Knight C., Kainz B., Rueckert D.:
Fetal skull segmentation in 3D ultrasound via structured geodesic random forest
International Workshop on Fetal and Infant Image Analysis, FIFI 2017 and 4th International Workshop on Ophthalmic Medical Image Analysis, OMIA 2017 held in Conjunction with 20th International Conference on Medical Image Computing and Computer Assisted Intervention, MICCAI 2017 (Quebec City, QC, CAN, 14/09/2017 - 14/09/2017)
In: M. Jorge Cardoso, Tal Arbel (ed.): Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2017
DOI: 10.1007/978-3-319-67561-9_3
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Hou B., Alansary A., McDonagh S., Davidson A., Rutherford M., Hajnal JV., Rueckert D., Glocker B., Kainz B.:
Predicting slice-to-volume transformation in presence of arbitrary subject motion
20th International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2017 (Quebec City, QC, CAN, 11/09/2017 - 13/09/2017)
In: Pierre Jannin, Simon Duchesne, Maxime Descoteaux, Alfred Franz, D. Louis Collins, Lena Maier-Hein (ed.): Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2017
DOI: 10.1007/978-3-319-66185-8_34
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Kainz B., Bhatia K., Vercauteren T.:
Preface RAMBO 2017
Springer Verlag, 2017
ISBN: 9783319675633
URL: https://www.scopus.com/record/display.uri?eid=2-s2.0-85029585297&origin=inward
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Mcdonagh S., Hou B., Alansary A., Oktay O., Kamnitsas K., Rutherford M., Hajnal JV., Kainz B.:
Context-sensitive super-resolution for fast fetal magnetic resonance imaging
5th International Workshop on Computational Methods for Molecular Imaging, CMMI 2017, 2nd International Workshop on Reconstruction and Analysis of Moving Body Organs, RAMBO 2017 and 1st International Stroke Workshop on Imaging and Treatment Challenges, SWITCH 2017 held in Conjunction with 20th International Conference on Medical Image Computing and Computer Assisted Intervention, MICCAI 2017 (Quebec City, QC, CAN, 14/09/2017 - 14/09/2017)
In: M. Jorge Cardoso, Tal Arbel (ed.): Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2017
DOI: 10.1007/978-3-319-67564-0_12
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Miao H., Mistelbauer G., Karimov A., Alansary A., Davidson A., Lloyd DFA., Damodaram M., Story L., Hutter J., Hajnal JV., Rutherford M., Preim B., Kainz B., Groeller ME.:
Placenta maps: In utero placental health assessment of the human fetus
In: IEEE Transactions on Visualization and Computer Graphics 23 (2017), p. 1612-1623
ISSN: 1077-2626
DOI: 10.1109/TVCG.2017.2674938
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Rajchl M., Lee MCH., Oktay O., Kamnitsas K., Passerat-Palmbach J., Bai W., Damodaram M., Rutherford MA., Hajnal JV., Kainz B., Rueckert D.:
DeepCut: Object Segmentation from Bounding Box Annotations Using Convolutional Neural Networks
In: IEEE Transactions on Medical Imaging 36 (2017), p. 674-683
ISSN: 0278-0062
DOI: 10.1109/TMI.2016.2621185
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Toisoul A., Rueckert D., Kainz B.:
Accessible GLSL shader programming
38th Annual Conference on European Association for Computer Graphics, EUROGRAPHICS 2017 (Lyon, FRA, 24/04/2017 - 28/04/2017)
In: European Association for Computer Graphics - 38th Annual Conference, EUROGRAPHICS 2017 - Education Papers 2017
DOI: 10.2312/eged.20171024
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2016

Alansary A., Kamnitsas K., Davidson A., Khlebnikov R., Rajchl M., Malamateniou C., Rutherford M., Hajnal JV., Glocker B., Rueckert D., Kainz B.:
Fast fully automatic segmentation of the human placenta from motion corrupted MRI
In: Gozde Unal, Sebastian Ourselin, Leo Joskowicz, Mert R. Sabuncu, William Wells (ed.): Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2016
DOI: 10.1007/978-3-319-46723-8_68
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Baumgartner CF., Kamnitsas K., Matthew J., Smith S., Kainz B., Rueckert D.:
Real-time standard scan plane detection and localisation in fetal ultrasound using fully convolutional neural networks
In: Gozde Unal, Sebastian Ourselin, Leo Joskowicz, Mert R. Sabuncu, William Wells (ed.): Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2016
DOI: 10.1007/978-3-319-46723-8_24
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Rueckert D., Glocker B., Kainz B.:
Learning clinically useful information from images: Past, present and future
In: Medical Image Analysis 33 (2016), p. 1339-1351
ISSN: 1361-8415
DOI: 10.1016/j.media.2016.06.009
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2015

Alansary A., Lee M., Keraudren K., Kainz B., Malamateniou C., Rutherford M., Hajnal JV., Glocker B., Rueckert D.:
Automatic brain localization in fetal MRI using superpixel graphs
1st International Workshop on Machine Learning Meets Medical Imaging, MLMMI 2015 (Lille, FRA, 11/07/2015 - 11/07/2015)
In: Kanwal K. Bhatia, Herve Lombaert (ed.): Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2015
DOI: 10.1007/978-3-319-27929-9_2
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Bowles C., Nowlan NC., Hayat TTA., Malamateniou C., Rutherford M., Hajnal JV., Rueckert D., Kainz B.:
Machine learning for the automatic localisation of foetal body parts in cine-MRI scans
Medical Imaging 2015: Image Processing (Orlando, FL, USA, 24/02/2015 - 26/02/2015)
In: Martin A. Styner, Sebastien Ourselin (ed.): Progress in Biomedical Optics and Imaging - Proceedings of SPIE 2015
DOI: 10.1117/12.2081669
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Egger J., Busse H., Brandmaier P., Seider D., Gawlitza M., Strocka S., Voglreiter P., Dokter M., Hofmann M., Kainz B., Chen X., Hann A., Boechat P., Yu W., Freisleben B., Alhonnoro T., Pollari M., Moche M., Schmalstieg D.:
RFA-cut: Semi-automatic segmentation of radiofrequency ablation zones with and without needles via optimal s-t-cuts
37th Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBC 2015 (Milan, ITA, 25/08/2015 - 29/08/2015)
In: Proceedings of the Annual International Conference of the IEEE Engineering in Medicine and Biology Society, EMBS 2015
DOI: 10.1109/EMBC.2015.7318883
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Egger J., Busse H., Brandmaier P., Seider D., Gawlitza M., Strocka S., Voglreiter P., Dokter M., Hofmann M., Kainz B., Hann A., Chen X., Alhonnoro T., Pollari M., Schmalstieg D., Moche M.:
Interactive Volumetry of Liver Ablation Zones
In: Scientific Reports 5 (2015), Article No.: 15373
ISSN: 2045-2322
DOI: 10.1038/srep15373
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Kainz B., Alansary A., Malamateniou C., Keraudren K., Rutherford M., Hajnal JV., Rueckert D.:
Flexible reconstruction and correction of unpredictable motion from stacks of 2D images
18th International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2015 (Munich, DEU, 05/10/2015 - 09/10/2015)
In: Joachim Hornegger, Alejandro F. Frangi, William M. Wells, Alejandro F. Frangi, Nassir Navab, Joachim Hornegger, Nassir Navab, William M. Wells, William M. Wells, Alejandro F. Frangi, Joachim Hornegger, Nassir Navab (ed.): Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2015
DOI: 10.1007/978-3-319-24571-3_66
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Kainz B., Malamateniou C., Ferrazzi G., Murgasova M., Egger J., Keraudren K., Rutherford M., Hajnal JV., Rueckert D.:
Adaptive scan strategies for fetal MRI imaging using slice to volume techniques
12th IEEE International Symposium on Biomedical Imaging, ISBI 2015 (Brooklyn, NY, USA, 16/04/2015 - 19/04/2015)
In: Proceedings - International Symposium on Biomedical Imaging 2015
DOI: 10.1109/ISBI.2015.7164004
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Kainz B., Steinberger M., Wein W., Kuklisova-Murgasova M., Malamateniou C., Keraudren K., Torsney-Weir T., Rutherford M., Aljabar P., Hajnal JV., Rueckert D.:
Fast Volume Reconstruction from Motion Corrupted Stacks of 2D Slices
In: IEEE Transactions on Medical Imaging 34 (2015), p. 1901-1913
ISSN: 0278-0062
DOI: 10.1109/TMI.2015.2415453
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Keraudren K., Kainz B., Oktay O., Kyriakopoulou V., Rutherford M., Hajnal JV., Rueckert D.:
Automated localization of fetal organs in MRI using random forests with steerable features
18th International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2015 (Munich, DEU, 05/10/2015 - 09/10/2015)
In: Alejandro F. Frangi, Nassir Navab, Joachim Hornegger, William M. Wells (ed.): Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2015
DOI: 10.1007/978-3-319-24574-4_74
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2014

Kainz B., Keraudren K., Kyriakopoulou V., Rutherford M., Hajnal JV., Rueckert D.:
Fast fully automatic brain detection in fetal MRI using dense rotation invariant image descriptors
2014 IEEE 11th International Symposium on Biomedical Imaging, ISBI 2014 (Beijing, CHN, 29/04/2014 - 02/05/2014)
In: 2014 IEEE 11th International Symposium on Biomedical Imaging, ISBI 2014 2014
DOI: 10.1109/isbi.2014.6868098
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Kainz B., Malamateniou C., Murgasova M., Keraudren K., Rutherford M., Hajnal JV., Rueckert D.:
Motion corrected 3D reconstruction of the fetal thorax from prenatal MRI
17th International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2014 (USA, 14/09/2014 - 18/09/2014)
In: Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2014
DOI: 10.1007/978-3-319-10470-6_36
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Kainz B., Voglreiter P., Sereinigg M., Wiederstein-Grasser I., Mayrhauser U., Köstenbauer S., Pollari M., Khlebnikov R., Seise M., Alhonnoro T., Häme Y., Seider D., Flanagan R., Bost C., Mühl J., O'Neill D., Peng T., Payne S., Rueckert D., Schmalstieg D., Moche M., Kolesnik M., Stiegler P., Portugaller RH.:
High-resolution contrast enhanced multi-phase hepatic computed tomography data fromaporcine Radio-Frequency Ablation study
2014 IEEE 11th International Symposium on Biomedical Imaging, ISBI 2014 (Beijing, CHN, 29/04/2014 - 02/05/2014)
In: 2014 IEEE 11th International Symposium on Biomedical Imaging, ISBI 2014 2014
DOI: 10.1109/isbi.2014.6867814
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Keraudren K., Kuklisova-Murgasova M., Kyriakopoulou V., Malamateniou C., Rutherford MA., Kainz B., Hajnal JV., Rueckert D.:
Automated fetal brain segmentation from 2D MRI slices for motion correction
In: NeuroImage 101 (2014), p. 633-643
ISSN: 1053-8119
DOI: 10.1016/j.neuroimage.2014.07.023
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Khlebnikov R., Voglreiter P., Steinberger M., Kainz B., Schmalstieg D.:
Parallel irradiance caching for interactive monte-carlo direct volume rendering
In: Computer Graphics Forum 33 (2014), p. 61-70
ISSN: 0167-7055
DOI: 10.1111/cgf.12362
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Steinberger M., Kenzel M., Kainz B., Mueller J., Wonka P., Schmalstieg D.:
Parallel generation of architecture on the GPU
In: Computer Graphics Forum 33 (2014), p. 73-82
ISSN: 0167-7055
DOI: 10.1111/cgf.12312
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Steinberger M., Kenzel M., Kainz B., Wonka P., Schmalstieg D.:
On-the-fly generation and rendering of infinite cities on the GPU
In: Computer Graphics Forum 33 (2014), p. 105-114
ISSN: 0167-7055
DOI: 10.1111/cgf.12315
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2013

Kerbl B., Voglreiter P., Khlebnikov R., Schmalstieg D., Seider D., Moche M., Stiegler P., Portugaller RH., Kainz B.:
Intervention planning of hepatocellular carcinoma radio-frequency ablations
International Workshop on Clinical Image-Based Procedures: From Planning to Intervention, CLIP 2012 - Held in Conjunction with MICCAI 2012 (FRA, 05/10/2012 - 05/10/2012)
In: Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2013
DOI: 10.1007/978-3-642-38079-2_2
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Khlebnikov R., Kainz B., Steinberger M., Schmalstieg D.:
Noise-based volume rendering for the visualization of multivariate volumetric data
In: IEEE Transactions on Visualization and Computer Graphics 19 (2013), p. 2926-2935
ISSN: 1077-2626
DOI: 10.1109/TVCG.2013.180
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2012

Kainz B., Hauswiesner S., Reitmayr G., Steinberger M., Grasset R., Gruber L., Veas E., Kalkofen D., Seichter H., Schmalstieg D.:
Omni kinect: Real-time dense volumetric data acquisition and applications
18th ACM Symposium on Virtual Reality Software and Technology, VRST 2012 (CAN, 10/12/2012 - 12/12/2012)
In: Proceedings of the ACM Symposium on Virtual Reality Software and Technology, VRST 2012
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Kainz B., Portugaller RH., Seider D., Moche M., Stiegler P., Schmalstieg D.:
Volume visualization in the clinical practice
6th International Workshop on Augmented Environments for Computer-Assisted Interventions, AE-CAI 2011, Held in Conjunction with the Medical Image Computing and Computer-Assisted Interventions, MICCAI 2011 (CAN, 22/09/2011 - 22/09/2011)
In: Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2012
DOI: 10.1007/978-3-642-32630-1_8
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Khlebnikov R., Kainz B., Steinberger M., Streit M., Schmalstieg D.:
Procedural texture synthesis for zoom-independent visualization of multivariate data
In: Computer Graphics Forum 31 (2012), p. 1355-1364
ISSN: 0167-7055
DOI: 10.1111/j.1467-8659.2012.03127.x
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Steinberger M., Kainz B., Hauswiesner S., Khlebnikov R., Kalkofen D., Schmalstieg D.:
Ray prioritization using stylization and visual saliency
In: Computers & Graphics 36 (2012), p. 673-684
ISSN: 0097-8493
DOI: 10.1016/j.cag.2012.03.037
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Steinberger M., Kainz B., Kerbl B., Hauswiesner S., Kenzel M., Schmalstieg D.:
Softshell: Dynamic scheduling on GPUs
In: Acm Transactions on Graphics 31 (2012), Article No.: 161
ISSN: 0730-0301
DOI: 10.1145/2366145.2366180
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Steinberger M., Kenzel M., Kainz B., Schmalstieg D.:
ScatterAlloc: Massively parallel dynamic memory allocation for the GPU
2012 Innovative Parallel Computing, InPar 2012 (USA, 13/05/2012 - 14/05/2012)
In: 2012 Innovative Parallel Computing, InPar 2012 2012
DOI: 10.1109/InPar.2012.6339604
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Voglreiter P., Steinberger M., Schmalstieg D., Kainz B.:
Volumetric real-time particle-based representation of large unstructured tetrahedral polygon meshes
MICCAI 2012 International Workshop on Mesh Processing in Medical Image Analysis, MeshMed 2012 (FRA, 01/10/2012 - 01/10/2012)
In: Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2012
DOI: 10.1007/978-3-642-33463-4_16
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2011

Kainz B., Steinberger M., Hauswiesner S., Khlebnikov R., Kalkofen D., Schmalstieg D.:
Using perceptual features to prioritize ray-based image generation
2011 15th ACM SIGGRAPH Symposium on Interactive 3D Graphics and Games, I3D'11 (USA, 18/02/2011 - 20/02/2011)
In: Proceedings of the Symposium on Interactive 3D Graphics 2011
DOI: 10.1145/1944745.1944795
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Kainz B., Steinberger M., Hauswiesner S., Khlebnikov R., Schmalstieg D.:
Stylization-based ray prioritization for guaranteed frame rates
9th International Symposium on Non-Photorealistic Animation and Rendering, NPAR 2011, Co-located with ACM SIGGRAPH 2011 (CAN, 05/08/2011 - 07/08/2011)
In: NPAR Symposium on Non-Photorealistic Animation and Rendering 2011
DOI: 10.1145/2024676.2024685
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Khlebnikov R., Kainz B., Muehl J., Schmalstieg D.:
Crepuscular rays for tumor accessibility planning
In: IEEE Transactions on Visualization and Computer Graphics 17 (2011), p. 2163-2172
ISSN: 1077-2626
DOI: 10.1109/TVCG.2011.184
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2010

Alhonnoro T., Pollari M., Lilja M., Flanagan R., Kainz B., Muehl J., Mayrhauser U., Portugaller H., Stiegler P., Tscheliessnigg K.:
Vessel segmentation for ablation treatment planning and simulation
13th International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2010 (CHN, 20/09/2010 - 24/09/2010)
In: Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) 2010
DOI: 10.1007/978-3-642-15705-9_6
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2009

Kainz B., Grabner M., Bornik A., Hauswiesner S., Muehl J., Schmalstieg D.:
Ray Casting of Multiple Volumetric Datasets with Polyhedral Boundaries on Manycore GPUs
In: Acm Transactions on Graphics 28 (2009), p. 1-9
ISSN: 0730-0301
DOI: 10.1145/1618452.1618498
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Kainz B., Reiter U., Reiter G., Schmalstieg D.:
In vivo interactive visualization of four-dimensional blood flow patterns : RRRealtime assessment of volumetric phase contrast MRI
In: Visual Computer 25 (2009), p. 853-862
ISSN: 0178-2789
DOI: 10.1007/s00371-009-0315-7
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Muehl J., Kainz B., Bornik A., Grabner M., Hauswiesner S., Schmalstieg D.:
The future of volume graphics in medical virtual reality
World Congress on Medical Physics and Biomedical Engineering: Image Processing, Biosignal Processing, Modelling and Simulation, Biomechanics (DEU, 07/09/2009 - 12/09/2009)
In: IFMBE Proceedings 2009
DOI: 10.1007/978-3-642-03882-2_357
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Muehl JK., Kainz B., Portugaller HR., Stiegler PB., Bauer CH.:
Computer oriented image acquisition of the liver: Toward a better numerical model for radiofrequency ablation
31st Annual International Conference of the IEEE Engineering in Medicine and Biology Society: Engineering the Future of Biomedicine, EMBC 2009 (USA, 02/09/2009 - 06/09/2009)
In: Proceedings of the 31st Annual International Conference of the IEEE Engineering in Medicine and Biology Society: Engineering the Future of Biomedicine, EMBC 2009 2009
DOI: 10.1109/IEMBS.2009.5334539
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2008

Kainz B.:
Automatic differentiation for GPU-accelerated 2D/3D registration
2008
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Kainz B., Grabner M., Rüther M.:
Fast marker based C-Arm pose estimation
11th International Conference on Medical Image Computing and Computer-Assisted Intervention, MICCAI 2008 (New York, NY)
DOI: 10.1007/978-3-540-85990-1_78
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Reiter G., Reiter U., Kovacs G., Kainz B., Schmidt K., Maier R., Olschewski H., Rienmueller R.:
Magnetic resonance-derived 3-dimensional blood flow patterns in the main pulmonary artery as a marker of pulmonary hypertension and a measure of elevated mean pulmonary arterial pressure.
In: Circulation. Cardiovascular genetics 1 (2008), p. 23-30
ISSN: 1942-3268
DOI: 10.1161/CIRCIMAGING.108.780247
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Kainz B.:
Realtime 3D graphics programming using the Quake3 engine
Proceeding CGEMS: Computer graphics educational materials source
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